References

Allaire, J. J., Christopher Gandrud, Kenton Russell, and CJ Yetman. 2017. networkD3: D3 JavaScript Network Graphs from r. https://CRAN.R-project.org/package=networkD3.
Allaire, JJ, and Christophe Dervieux. 2024. quarto: R Interface to Quarto Markdown Publishing System. https://CRAN.R-project.org/package=quarto.
Allaire, JJ, Yihui Xie, Christophe Dervieux, Jonathan McPherson, Javier Luraschi, Kevin Ushey, Aron Atkins, et al. 2024. rmarkdown: Dynamic Documents for r. https://github.com/rstudio/rmarkdown.
Barrett, Tyson, Matt Dowle, Arun Srinivasan, Jan Gorecki, Michael Chirico, and Toby Hocking. 2024. data.table: Extension of data.frame. https://CRAN.R-project.org/package=data.table.
Chang, Winston. 2018. gcookbook: Data for R Graphics Cookbook. https://CRAN.R-project.org/package=gcookbook.
CODER, R. 2024. ggbernie: A Geom for Adding Bernies. https://github.com/R-CoderDotCom/ggbernie.
Corporation, Microsoft, and Steve Weston. 2022. doParallel: Foreach Parallel Adaptor for the parallel Package. https://github.com/RevolutionAnalytics/doparallel.
Dasgupta, Abhijit. 2014. reprtree: Representative Trees from Ensembles. https://github.com/araastat/reprtree.
de Vries, Andrie, and Brian D. Ripley. 2024. ggdendro: Create Dendrograms and Tree Diagrams Using ggplot2. https://CRAN.R-project.org/package=ggdendro.
Francisco Rodriguez-Sanchez, and Connor P. Jackson. 2023. grateful: Facilitate Citation of r Packages. https://pakillo.github.io/grateful/.
Frick, Hannah, Fanny Chow, Max Kuhn, Michael Mahoney, Julia Silge, and Hadley Wickham. 2024. rsample: General Resampling Infrastructure. https://CRAN.R-project.org/package=rsample.
Friedman, Jerome, Robert Tibshirani, and Trevor Hastie. 2010. “Regularization Paths for Generalized Linear Models via Coordinate Descent.” Journal of Statistical Software 33 (1): 1–22. https://doi.org/10.18637/jss.v033.i01.
Garnier, Simon, Ross, Noam, Rudis, Robert, Camargo, et al. 2024. viridis(Lite) - Colorblind-Friendly Color Maps for r. https://doi.org/10.5281/zenodo.4679423.
Grothendieck, G. 2017. sqldf: Manipulate r Data Frames Using SQL. https://CRAN.R-project.org/package=sqldf.
Harrell Jr, Frank E. 2024. Hmisc: Harrell Miscellaneous. https://CRAN.R-project.org/package=Hmisc.
Heinzen, Ethan, Jason Sinnwell, Elizabeth Atkinson, Tina Gunderson, and Gregory Dougherty. 2021. arsenal: An Arsenal of R Functions for Large-Scale Statistical Summaries. https://CRAN.R-project.org/package=arsenal.
Hester, Jim, and Jennifer Bryan. 2024. glue: Interpreted String Literals. https://glue.tidyverse.org/.
Honaker, James, Gary King, and Matthew Blackwell. 2011. Amelia II: A Program for Missing Data.” Journal of Statistical Software 45 (7): 1–47. https://doi.org/10.18637/jss.v045.i07.
Hornik, Kurt. 2005. “A CLUE for CLUster Ensembles.” Journal of Statistical Software 14 (12). https://doi.org/10.18637/jss.v014.i12.
———. 2023. clue: Cluster Ensembles. https://CRAN.R-project.org/package=clue.
Izrailev, Sergei. 2024. tictoc: Functions for Timing r Scripts, as Well as Implementations of Stack and StackList Structures. https://CRAN.R-project.org/package=tictoc.
James, Gareth, Daniela Witten, Trevor Hastie, and Rob Tibshirani. 2021. ISLR: Data for an Introduction to Statistical Learning with Applications in r. https://CRAN.R-project.org/package=ISLR.
Kassambara, Alboukadel, and Fabian Mundt. 2020. factoextra: Extract and Visualize the Results of Multivariate Data Analyses. https://CRAN.R-project.org/package=factoextra.
Kowarik, Alexander, and Matthias Templ. 2016. “Imputation with the R Package VIM.” Journal of Statistical Software 74 (7): 1–16. https://doi.org/10.18637/jss.v074.i07.
Kuhn, Max, Davis Vaughan, and Emil Hvitfeldt. 2024. yardstick: Tidy Characterizations of Model Performance. https://CRAN.R-project.org/package=yardstick.
Kuhn, Max, and Hadley Wickham. 2020. Tidymodels: A Collection of Packages for Modeling and Machine Learning Using Tidyverse Principles. https://www.tidymodels.org.
Kuhn, and Max. 2008. “Building Predictive Models in r Using the Caret Package.” Journal of Statistical Software 28 (5): 1–26. https://doi.org/10.18637/jss.v028.i05.
Larmarange, Joseph. 2024. labelled: Manipulating Labelled Data. https://CRAN.R-project.org/package=labelled.
Liaw, Andy, and Matthew Wiener. 2002. “Classification and Regression by randomForest.” R News 2 (3): 18–22. https://CRAN.R-project.org/doc/Rnews/.
Massicotte, Philippe, and Dirk Eddelbuettel. 2022. gtrendsR: Perform and Display Google Trends Queries. https://CRAN.R-project.org/package=gtrendsR.
Meyer, David, Evgenia Dimitriadou, Kurt Hornik, Andreas Weingessel, and Friedrich Leisch. 2023. E1071: Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien. https://CRAN.R-project.org/package=e1071.
Meyer, David, Achim Zeileis, and Kurt Hornik. 2006. “The Strucplot Framework: Visualizing Multi-Way Contingency Tables with Vcd.” Journal of Statistical Software 17 (3): 1–48. https://doi.org/10.18637/jss.v017.i03.
Meyer, David, Achim Zeileis, Kurt Hornik, and Michael Friendly. 2023. vcd: Visualizing Categorical Data. https://CRAN.R-project.org/package=vcd.
Milborrow, Stephen. 2024. rpart.plot: Plot rpart Models: An Enhanced Version of plot.rpart. https://CRAN.R-project.org/package=rpart.plot.
Müller, Kirill. 2020. here: A Simpler Way to Find Your Files. https://CRAN.R-project.org/package=here.
Murrell, Paul. 2015. compare: Comparing Objects for Differences. https://CRAN.R-project.org/package=compare.
Pruim, Randall. 2015. NHANES: Data from the US National Health and Nutrition Examination Study. https://CRAN.R-project.org/package=NHANES.
R Core Team. 2024. R: A Language and Environment for Statistical Computing. Vienna, Austria: R Foundation for Statistical Computing. https://www.R-project.org/.
Ripley, Brian. 2023. tree: Classification and Regression Trees. https://CRAN.R-project.org/package=tree.
Sarkar, Deepayan. 2008. Lattice: Multivariate Data Visualization with r. New York: Springer. http://lmdvr.r-forge.r-project.org.
Schloerke, Barret, Di Cook, Joseph Larmarange, Francois Briatte, Moritz Marbach, Edwin Thoen, Amos Elberg, and Jason Crowley. 2024. GGally: Extension to ggplot2. https://CRAN.R-project.org/package=GGally.
Simon, Noah, Jerome Friedman, Robert Tibshirani, and Trevor Hastie. 2011. “Regularization Paths for Cox’s Proportional Hazards Model via Coordinate Descent.” Journal of Statistical Software 39 (5): 1–13. https://doi.org/10.18637/jss.v039.i05.
Tay, J. Kenneth, Balasubramanian Narasimhan, and Trevor Hastie. 2023. “Elastic Net Regularization Paths for All Generalized Linear Models.” Journal of Statistical Software 106 (1): 1–31. https://doi.org/10.18637/jss.v106.i01.
Therneau, Terry, and Beth Atkinson. 2023. rpart: Recursive Partitioning and Regression Trees. https://CRAN.R-project.org/package=rpart.
Ushey, Kevin, and Hadley Wickham. 2024. renv: Project Environments. https://CRAN.R-project.org/package=renv.
van Buuren, Stef, and Karin Groothuis-Oudshoorn. 2011. mice: Multivariate Imputation by Chained Equations in r.” Journal of Statistical Software 45 (3): 1–67. https://doi.org/10.18637/jss.v045.i03.
Venables, W. N., and B. D. Ripley. 2002. Modern Applied Statistics with s. Fourth. New York: Springer. https://www.stats.ox.ac.uk/pub/MASS4/.
Vu, Vincent Q., and Michael Friendly. 2024. ggbiplot: A Grammar of Graphics Implementation of Biplots. https://CRAN.R-project.org/package=ggbiplot.
Waring, Elin, Michael Quinn, Amelia McNamara, Eduardo Arino de la Rubia, Hao Zhu, and Shannon Ellis. 2022. skimr: Compact and Flexible Summaries of Data. https://CRAN.R-project.org/package=skimr.
Warnes, Gregory R., Ben Bolker, Lodewijk Bonebakker, Robert Gentleman, Wolfgang Huber, Andy Liaw, Thomas Lumley, et al. 2024. gplots: Various r Programming Tools for Plotting Data. https://CRAN.R-project.org/package=gplots.
Warnes, Gregory R., Ben Bolker, Thomas Lumley, Arni Magnusson, Bill Venables, Genei Ryodan, and Steffen Moeller. 2023. gtools: Various r Programming Tools. https://CRAN.R-project.org/package=gtools.
Wei, Taiyun, and Viliam Simko. 2021. R Package corrplot: Visualization of a Correlation Matrix. https://github.com/taiyun/corrplot.
Weihs, Claus, Uwe Ligges, Karsten Luebke, and Nils Raabe. 2005. “klaR Analyzing German Business Cycles.” In Data Analysis and Decision Support, edited by D. Baier, R. Decker, and L. Schmidt-Thieme, 335–43. Berlin: Springer-Verlag.
Wickham, Hadley, Mara Averick, Jennifer Bryan, Winston Chang, Lucy D’Agostino McGowan, Romain François, Garrett Grolemund, et al. 2019. “Welcome to the tidyverse.” Journal of Open Source Software 4 (43): 1686. https://doi.org/10.21105/joss.01686.
Wickham, Hadley, Thomas Lin Pedersen, and Dana Seidel. 2023. scales: Scale Functions for Visualization. https://CRAN.R-project.org/package=scales.
William Revelle. 2024. psych: Procedures for Psychological, Psychometric, and Personality Research. Evanston, Illinois: Northwestern University. https://CRAN.R-project.org/package=psych.
Xie, Yihui. 2014. knitr: A Comprehensive Tool for Reproducible Research in R.” In Implementing Reproducible Computational Research, edited by Victoria Stodden, Friedrich Leisch, and Roger D. Peng. Chapman; Hall/CRC.
———. 2015. Dynamic Documents with R and Knitr. 2nd ed. Boca Raton, Florida: Chapman; Hall/CRC. https://yihui.org/knitr/.
———. 2024. knitr: A General-Purpose Package for Dynamic Report Generation in r. https://yihui.org/knitr/.
Xie, Yihui, J. J. Allaire, and Garrett Grolemund. 2018. R Markdown: The Definitive Guide. Boca Raton, Florida: Chapman; Hall/CRC. https://bookdown.org/yihui/rmarkdown.
Xie, Yihui, Christophe Dervieux, and Emily Riederer. 2020. R Markdown Cookbook. Boca Raton, Florida: Chapman; Hall/CRC. https://bookdown.org/yihui/rmarkdown-cookbook.
Yoshida, Kazuki, and Alexander Bartel. 2022. tableone: Create Table 1 to Describe Baseline Characteristics with or Without Propensity Score Weights. https://CRAN.R-project.org/package=tableone.
Zeileis, Achim, David Meyer, and Kurt Hornik. 2007. “Residual-Based Shadings for Visualizing (Conditional) Independence.” Journal of Computational and Graphical Statistics 16 (3): 507–25. https://doi.org/10.1198/106186007X237856.
Zhang, Dabao. 2023. rsq: R-Squared and Related Measures. https://CRAN.R-project.org/package=rsq.
Zhu, Hao. 2024. kableExtra: Construct Complex Table with kable and Pipe Syntax. https://CRAN.R-project.org/package=kableExtra.